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General Information
ZIRC
ZFIN ID: ZDB-GENE-050522-308
Gene Name: SIX homeobox 6b
Gene Symbol: six6b
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: si:dkey-225h23.3, zgc:110344

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and transcription regulatory region sequence-specific DNA binding activity. Involved in cell proliferation  ...
GENE EXPRESSION
All Expression Data: Fig. 4 from Armant et al., 2013
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH six6b HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Optic disc anomalies with retinal and/or macular dystrophy 212550
DISEASE ASSOCIATED WITH six6b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell proliferation involved in compound eye morphogenesis (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 11)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA six6b-201 (1) 1615
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM six6b No data available
MARKER RELATIONSHIPS
six6b Contained in: [BAC] DKEY-225H23 (1) (order this)
six6b Encodes: [cDNA] MGC:110344 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001020585 (1) 1615 bp
Genomic GenBank:BX649231 (1) 153569 bp
Select Tool
Polypeptide UniProtKB:Q5TYZ2 (1) 245 aa
Sequence Clusters UniGene:82855 (1)
Sequence Information (all 13)
ORTHOLOGY for six6b ( Chr: 20 )
CITATIONS (29)