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ZIRC
ZFIN ID: ZDB-GENE-050522-28
Gene Name: BARX homeobox 1
Gene Symbol: barx1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:110654

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(Including Attributions)
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding activity transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity; involved in  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
barx1_unrecovered Point Mutation Unknown Unknown ENU
fh330 Point Mutation Unknown Premature Stop ENU
fh331 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la010758Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10360 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH barx1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH barx1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cartilage development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA barx1-201 (1) 1430
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM barx1 No data available
    MARKER RELATIONSHIPS
    barx1Contained in: [BAC] DKEY-189A9 (1) (order this)
    barx1Encodes: [EST] IMAGE:7164742 (1) (order this)
    [cDNA] MGC:110654 (1) (order this), MGC:162464 (1) (order this), MGC:192281 (1) (order this), MGC:193762 (1) (order this), MGC:193776 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024949 (1) 1461bp
    Genomic GenBank:CR548622 (1) 137993bp
    Select Tool
    Polypeptide UniProtKB:B2GRF3 (1) 248aa
    Sequence Clusters UniGene:87457 (1)
    Sequence Information (all 33)
    ORTHOLOGY for barx1 (Chr: 11)
    CITATIONS (52)