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ZIRC
ZFIN ID: ZDB-GENE-050522-139
Gene Name: zgc:109982
Gene Symbol: zgc:109982    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have estradiol 17-beta-dehydrogenase activity. Predicted to be involved in estrogen biosynthetic process and oxidation-reduction process. Predicted to localize to the cytoplasm. Is expressed in epiphysis; pharynx; retina; and retinal photoreceptor layer. Orthologous to human RDH8 (retinol dehydrogenase 8).
Genome Resources: Alliance (1),  Gene:553564 (1),  Ensembl(GRCz11):ENSDARG00000099217 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:109982 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:109982 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process estrogen biosynthetic process (more)
Cellular Component cytoplasm (more)
Molecular Function estradiol 17-beta-dehydrogenase activity (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA zgc:109982-201 (1)    Ensembl 1237
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM zgc:109982 No data available
MARKER RELATIONSHIPS
zgc:109982 Contained in: [BAC] CH211-252P3 (1) (order this)
zgc:109982 Encodes: [cDNA] MGC:109982 (1) (order this), MGC:191519 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001020543 (1) 1253 bp
Genomic GenBank:BX511118 (1) 115906 bp
Select Tool
Polypeptide UniProtKB:Q504A4 (1) 318 aa
Sequence Clusters UniGene:133603 (1)
Sequence Information (all 14)
ORTHOLOGY for zgc:109982 ( Chr: 6 )
CITATIONS (11)