ZFIN ID: ZDB-GENE-050419-245
Gene Name: calpain 12
Gene Symbol: capn12    Nomenclature History

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Previous Name: si:ch211-160d20.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity and calcium-dependent cysteine-type endopeptidase activity. Involved in keratinocyte differentiation. Predicted to localize to cytoplasm. Orthologous to human CAPN12 (calpain 12).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000010758 (1)
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Wild-type Stages, Structures: Cleavage:16-cell (1.5h-1.75h) to Cleavage:16-cell (1.5h-1.75h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la013284Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la020419Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • mn0261Gt Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11881 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43148 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-capn12 N/A 1
    DISEASE ASSOCIATED WITH capn12 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH capn12 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process keratinocyte differentiation (more)
    Cellular Component cytoplasm (more)
    Molecular Function calcium-dependent cysteine-type endopeptidase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA capn12-201 (1)    Ensembl 2383
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM capn12 No data available
    MARKER RELATIONSHIPS
    capn12 Contained in: [BAC] CH211-160D20 (1), DKEY-7L12 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    Genomic GenBank:BX248121 (1) 201816 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QL66 (1) 713 aa
    Sequence Information (all 8)
    ORTHOLOGY for capn12 ( Chr: 18 )
    CITATIONS (25)