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General Information
ZIRC
ZFIN ID: ZDB-GENE-050417-172
Gene Name: RAB42, member RAS oncogene family
Gene Symbol: rab42b
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:112009

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTPase activity. Predicted to be involved in Rab protein signal transduction and intracellular protein transport. Orthologous to human RAB42 (RAB42, member RAS oncogene family).
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rab42b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rab42b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process intracellular protein transport (more)
Cellular Component Golgi apparatus (more)
Molecular Function GTPase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001806 (1)
  • InterPro:IPR005225 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00071 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rab42b-002 (1) 1306
    mRNA rab42b-202 (1) 1030
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM rab42b No data available
    MARKER RELATIONSHIPS
    rab42bContained in: [BAC] DKEY-34D22 (1) (order this)
    rab42bEncodes: [cDNA] MGC:112009 (1) (order this), MGC:174297 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017683 (1) 1070bp
    Genomic GenBank:CR936484 (1) 120133bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IAR3 (1) 218aa
    Sequence Clusters UniGene:70343 (1)
    Sequence Information (all 16)
    ORTHOLOGY for rab42b (Chr: 16)
    CITATIONS (16)