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ZIRC
ZFIN ID: ZDB-GENE-050320-92
Gene Name: cadherin 6
Gene Symbol: cdh6
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:103673

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including cadherin binding activity; cytoskeletal protein binding activity; and protein homodimerization activity. Involved in pronephros development and retina  ...
GENE EXPRESSION
All Expression Data: 26 figures from 8 publications
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa19781 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH cdh6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdh6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process pronephros development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 20)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cdh6-202 (1) 4217
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cdh6 No data available
    MARKER RELATIONSHIPS
    cdh6Contained in: [BAC] DKEY-151M6 (1) (order this)
    cdh6Encodes: [cDNA] MGC:103673 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013520 (1) 4275bp
    Genomic GenBank:CR925777 (1) 210659bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5BKW2 (1) 794aa
    Sequence Clusters UniGene:132516 (1)
    Sequence Information (all 15)
    ORTHOLOGY for cdh6 (Chr: 2)
    CITATIONS (29)