ZFIN ID: ZDB-GENE-050208-331
Gene Name: ATR interacting protein
Gene Symbol: atrip    Nomenclature History

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Previous Name: si:dkey-42i9.5

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to be involved in DNA damage checkpoint and DNA repair. Orthologous to human ATRIP (ATR interacting protein).
Genome Resources: Alliance (1),  Gene:558534 (1),  Ensembl(GRCz11):ENSDARG00000063076 (2)
GENE EXPRESSION
All Expression Data: Fig. 7 from Meng et al., 2017
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Pharyngula:High-pec (42.0h-48.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa43778 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atrip HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atrip VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process DNA damage checkpoint (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atrip-201 (1)    Ensembl 2552
    ncRNA atrip-002 (1) 540
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atrip No data available
    MARKER RELATIONSHIPS
    atrip Contained in: [BAC] DKEY-42I9 (1) (order this)
    atrip Encodes: [cDNA] MGC:162776 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001044867 (1) 2568 nt
    Genomic GenBank:BX465868 (1) 222195 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q1LXB1 (1) 737 aa
    Sequence Information (all 14)
    ORTHOLOGY for atrip ( Chr: 22 )
    CITATIONS (18)