ZFIN ID: ZDB-GENE-050208-324
Gene Name: leucine rich repeat (in FLII) interacting protein 1b
Gene Symbol: lrrfip1b    Nomenclature History

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Previous Name: si:ch211-186m12.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to be involved in regulation of transcription, DNA-templated. Is expressed in female organism. Orthologous to human LRRFIP1 (LRR binding FLII interacting protein 1).
Genome Resources: Alliance (1),  Gene:100321881 (1),  Ensembl(GRCz11):ENSDARG00000095170 (2)
GENE EXPRESSION
All Expression Data: Table S1 from Newman et al., 2019
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9289 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lrrfip1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lrrfip1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lrrfip1b-201 (1)    Ensembl 2798
    lrrfip1b-202 (1)    Ensembl 1434
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lrrfip1b No data available
    MARKER RELATIONSHIPS
    lrrfip1b Contained in: [BAC] CH73-141B18 (1), CH211-186M12 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005168724 (1) 3160 nt
    Genomic RefSeq:NW_018394629 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IRC4 (1) 524 aa
    Sequence Information (all 93)
    ORTHOLOGY for lrrfip1b ( Chr: 6 )
    CITATIONS (17)