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General Information
ZIRC
ZFIN ID: ZDB-GENE-050208-306
Gene Name: nocturnin a
Gene Symbol: nocta
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: ccrn4la, im:7147903

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have poly(A)-specific ribonuclease activity. Predicted to be involved in nuclear-transcribed mRNA poly(A) tail shortening. Predicted to localize to the CCR4-NOT complex; cytoplasm; and  ...
GENE EXPRESSION
All Expression Data: Fig. 1 from Yang et al., 2017
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14909 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nocta HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nocta VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process circadian regulation of gene expression (more)
    Molecular Function poly(A)-specific ribonuclease activity (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nocta-201 (1) 3390
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nocta No data available
    MARKER RELATIONSHIPS
    noctaContained in: [BAC] CH211-235E9 (order this)
    noctaEncodes: [EST] IMAGE:7147903 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005169619 (1) 2149bp
    Genomic GenBank:AL929007 (1) 187464bp
    Select Tool
    Polypeptide UniProtKB:E7F177 (1) 432aa
    Sequence Clusters UniGene:91274 (1)
    Sequence Information (all 10)
    ORTHOLOGY for nocta (Chr: 14)
    CITATIONS (15)