ZFIN ID: ZDB-GENE-050208-306
Gene Name: nocturnin a
Gene Symbol: nocta    Nomenclature History

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Previous Names: ccrn4la, im:7147903

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have 3'-5'-exoribonuclease activity. Predicted to be involved in circadian regulation of gene expression. Orthologous to human NOCT (nocturnin).
Genome Resources: Alliance (1),  Gene:572044 (1),  Ensembl(GRCz11):ENSDARG00000077726 (2)
GENE EXPRESSION
All Expression Data: Fig. 1 from Yang et al., 2017
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14909 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nocta HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nocta VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process circadian regulation of gene expression (more)
    Molecular Function poly(A)-specific ribonuclease activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nocta-201 (1)    Ensembl 3390
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nocta No data available
    MARKER RELATIONSHIPS
    nocta Contained in: [BAC] CH211-235E9
    nocta Encodes: [EST] IMAGE:7147903 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005169619 (1) 2149 nt
    Genomic GenBank:AL929007 (1) 187464 nt
    Select Tool
    Polypeptide UniProtKB:E7F177 (1) 432 aa
    Sequence Information (all 9)
    ORTHOLOGY for nocta ( Chr: 14 )
    CITATIONS (17)