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ZIRC
ZFIN ID: ZDB-GENE-050105-1
Gene Name: nuclear receptor subfamily 1, group d, member 1
Gene Symbol: nr1d1
Sequence Ontology ID : SO:0001217

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Previous Names: ear1 (1), Reverbalpha (1), zrev-erba (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in autophagy; circadian regulation of gene expression; and  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa19994 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sus010 Small Deletion Exon 2 Frameshift TALEN
    sus012 Indel Exon 2 Frameshift TALEN
    Targeting reagents:
    DISEASE ASSOCIATED WITH nr1d1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nr1d1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of gene expression (more)
    Cellular Component chromatin (more)
    Molecular Function DNA-binding transcription repressor activity, RNA polymerase II-specific (more)
    GO Terms (all 29)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nr1d1-201 (1) 2926
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nr1d1
    MARKER RELATIONSHIPS
    nr1d1 Contained in: [BAC] DKEY-225F5 (1) (order this)
    nr1d1 Encodes: [EST] ay391444 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205729 (1) 2803 bp
    Genomic GenBank:BX682558 (1) 146807 bp
    Select Tool
    Polypeptide UniProtKB:F1RAU6 (1) 637 aa
    Sequence Clusters UniGene:85991 (1)
    Sequence Information (all 16)
    ORTHOLOGY for nr1d1 ( Chr: 3 )
    CITATIONS (61)