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ZIRC
ZFIN ID: ZDB-GENE-041212-33
Gene Name: armadillo repeat containing 1
Gene Symbol: armc1    Nomenclature History

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Previous Name: zgc:103489

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Predicted to be involved in metal ion transport. Orthologous to human ARMC1 (armadillo repeat containing 1).
Genome Resources: Alliance (1),  Gene:494066 (1),  Ensembl(GRCz11):ENSDARG00000013861 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103489]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6769 Point Mutation Unknown Splice Site ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH armc1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH armc1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process metal ion transport (more)
Molecular Function metal ion binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR016617 (1)
  • InterPro:IPR036163 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA armc1-201 (1)    Ensembl 1842
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM armc1 No data available
    MARKER RELATIONSHIPS
    armc1 Contained in: [BAC] CH211-78P4 (1) (order this)
    armc1 Encodes: [cDNA] MGC:103489 (1) (order this), MGC:173735 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008609 (1) 1837 bp
    Genomic GenBank:CU019631 (1) 169715 bp
    Select Tool
    Polypeptide UniProtKB:Q5PR58 (1) 275 aa
    Sequence Clusters UniGene:26140 (1)
    Sequence Information (all 14)
    ORTHOLOGY for armc1 ( Chr: 24 )
    CITATIONS (17)