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ZIRC
ZFIN ID: ZDB-GENE-041210-8
Gene Name: sine oculis binding protein homolog (Drosophila) b
Gene Symbol: sobpb    Nomenclature History

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Previous Name: si:ch211-152c2.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Orthologous to human SOBP (sine oculis binding protein homolog).
Genome Resources: Alliance (1),  Gene:100006088 (1),  Ensembl(GRCz11):ENSDARG00000017386 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa26185 Point Mutation Unknown Premature Stop ENU
sa30844 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40195 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sobpb HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Mental retardation, anterior maxillary protrusion, and strabismus 613671
    DISEASE ASSOCIATED WITH sobpb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026092 (1)
  • Pfam:PF15279 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sobpb-202 (1)    Ensembl 2752
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sobpb No data available
    MARKER RELATIONSHIPS
    sobpb Contained in: [BAC] CH211-152C2 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001114983 (1) 2007 bp
    Genomic GenBank:BX649468 (1) 164705 bp
    Select Tool
    Polypeptide UniProtKB:A7XYJ6 (1) 668 aa
    Sequence Clusters UniGene:55473 (1)
    Sequence Information (all 15)
    ORTHOLOGY for sobpb ( Chr: 4 )
    CITATIONS (13)