ZFIN ID: ZDB-GENE-041024-9
Gene Name: proline-rich coiled-coil 1
Gene Symbol: prrc1
Sequence Ontology ID : SO:0000704

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Previous Names: fi37a08 (1), id:ibd5136, misty somites (1), mys (1), SAG20 (1), t2gtl20 (1), wu:fi37a08 (1), zgc:103484 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 10 figures from 4 publications
Directly Submitted Expression Data: 2 figures (3 images) from Kudoh et al., 2001 [ibd5136]
  4 figures (3 images) from Thisse et al., 2004 [IMAGE:7137963]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
nksag020Gt Transgenic Insertion Unknown Unknown DNA
sa41613 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 8 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH prrc1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH prrc1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process activation of protein kinase A activity (more)
    Cellular Component cytoplasm (more)
    Molecular Function protein kinase A regulatory subunit binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026533 (1)
  • InterPro:IPR026534 (1)
  • InterPro:IPR029001 (1)
  • Pfam:PF01931 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prrc1-001 (1) 2420
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM prrc1
    MARKER RELATIONSHIPS
    prrc1Contained in: [BAC] DKEY-184A18 (1) (order this)
    prrc1Encodes: [EST] fi37a08, ibd5136 (order this), IMAGE:7137963 (1) (order this)
    [cDNA] MGC:103484 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007060 (1) 2385bp
    Genomic GenBank:CR396586 (1) 225060bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5XJA3 (1) 435aa
    Sequence Clusters UniGene:79971 (1)
    Sequence Information (all 22)
    OTHER prrc1 GENE PAGES
  • Alliance (1)
  • Gene:474330 (1)
  • VEGA:OTTDARG00000022080 (1)
  • Ensembl(GRCz11):ENSDARG00000044304 (2)
  • ORTHOLOGY for prrc1 (Chr: 10)
    CITATIONS (23)