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ZIRC
ZFIN ID: ZDB-GENE-041024-9
Gene Name: proline-rich coiled-coil 1
Gene Symbol: prrc1
Sequence Ontology ID : SO:0001217

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Previous Names: fi37a08 (1), id:ibd5136, misty somites (1), mys (1), SAG20 (1), t2gtl20 (1), wu:fi37a08 (1), zgc:103484 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits protein kinase A regulatory subunit binding activity. Involved in activation of protein kinase A activity; epithelial structure maintenance; and somite specification. Localizes to the Golgi  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
nksag020Gt Transgenic Insertion Unknown Unknown DNA
sa41613 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH prrc1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH prrc1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process activation of protein kinase A activity (more)
    Cellular Component cytoplasm (more)
    Molecular Function protein kinase A regulatory subunit binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR026533 (1)
  • InterPro:IPR026534 (1)
  • InterPro:IPR029001 (1)
  • Pfam:PF01931 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA prrc1-201 (1) 2420
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM prrc1
    MARKER RELATIONSHIPS
    prrc1 Contained in: [BAC] DKEY-184A18 (1) (order this)
    prrc1 Encodes: [EST] fi37a08, ibd5136 (order this), IMAGE:7137963 (1) (order this)
    [cDNA] MGC:103484 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007060 (1) 2385 bp
    Genomic GenBank:CR396586 (1) 225060 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5XJA3 (1) 435 aa
    Sequence Clusters UniGene:79971 (1)
    Sequence Information (all 21)
    ORTHOLOGY for prrc1 ( Chr: 10 )
    CITATIONS (24)