ZFIN ID: ZDB-GENE-041014-347
Gene Name: solute carrier family 30 member 2
Gene Symbol: slc30a2    Nomenclature History

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Previous Names: si:ch211-243j20.1, ZnT2 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have zinc ion transmembrane transporter activity. Predicted to be involved in regulation of sequestering of zinc ion; response to zinc ion; and zinc ion transmembrane transport. Predicted to localize to plasma membrane. Is expressed in hindbrain; neurons; and spinal cord. Orthologous to several human genes including SLC30A3 (solute carrier family 30 member 3).
Genome Resources: Alliance (1),  Gene:563540 (1),  Ensembl(GRCz11):ENSDARG00000021305 (1)
GENE EXPRESSION
All Expression Data: 9 figures from 3 publications
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2005 [eu1681]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021624Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23775 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23776 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43504 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc30a2 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Zinc deficiency, transient neonatal 608118
    DISEASE ASSOCIATED WITH slc30a2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process zinc ion transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function zinc ion transmembrane transporter activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc30a2-201 (1)    Ensembl 1535
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc30a2 No data available
    MARKER RELATIONSHIPS
    slc30a2 Contained in: [BAC] CH211-243J20 (1), CH211-245H14 (1)
    slc30a2 Encodes: [EST] eu1681 (1)
    [cDNA] MGC:194331 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001045020 (1) 1011 nt
    Genomic GenBank:BX569783 (1) 200617 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QFA1 (1) 398 aa
    Sequence Information (all 19)
    ORTHOLOGY for slc30a2 ( Chr: 20 )
    CITATIONS (30)