ZFIN ID: ZDB-GENE-041014-323
Gene Name: prostaglandin-endoperoxide synthase 2b
Gene Symbol: ptgs2b

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Attributions

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Previous Names: Cox-2b (1), si:dkey-97o5.6

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 7 figures from 6 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  brain, eye, gill, gut (all 10) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13114 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23755 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29400 Point Mutation Unknown Premature Stop ENU
    Targeting reagents: CRISPR1-ptgs2b (1), MO1-ptgs2b (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ptgs2b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to organic cyclic compound (more)
    Molecular Function peroxidase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000742 (1)
  • InterPro:IPR010255 (1)
  • InterPro:IPR019791 (1)
  • InterPro:IPR029576 (1)
  • PROSITE:PS50026 (1)
  • PROSITE:PS50292 (1)
  • Pfam:PF03098 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ptgs2b-001 (1) 2556
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptgs2b No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ptgs2bContained in: [BAC] DKEY-97O5 (1) (order this)
    ptgs2bEncodes: [cDNA] MGC:162338 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025504 (1) 2534bp
    Genomic GenBank:BX323056 (1) 134072bp
    Select Tool
    Polypeptide UniProtKB:Q5RI06 (1) 606aa
    Sequence Clusters UniGene:48719 (1)
    Sequence Information (all 12)
    OTHER ptgs2b GENE PAGES
  • Gene:559020 (1)
  • VEGA:OTTDARG00000006192 (1)
  • Ensembl(GRCz10):ENSDARG00000010276 (1)
  • ORTHOLOGY for ptgs2b (Chr: 20)
    Species Symbol Chromosome Accession # Evidence
    Human PTGS2 1
  • Gene:5743
  • OMIM:600262
  • HGNC:9605
  • Amino acid sequence comparison (3)
    Conserved genome location (synteny) (3)
    Mouse Ptgs2 1
  • MGI:97798
  • Gene:19225
  • Amino acid sequence comparison (3)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (47)