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ZIRC
ZFIN ID: ZDB-GENE-041010-66
Gene Name: ELOVL fatty acid elongase 1a
Gene Symbol: elovl1a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: elovl1, zgc:103538 (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have fatty acid elongase activity. Involved in swim bladder development. Predicted to localize to the integral component of endoplasmic reticulum membrane. Is expressed in several  ...
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2004 [MGC:103538]
Wild-type Stages, Structures: Cleavage:64-cell (2.0h-2.25h) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH elovl1a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies 618527
DISEASE ASSOCIATED WITH elovl1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process swim bladder development (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function 3-oxo-arachidoyl-CoA synthase activity (more)
GO Terms (all 21)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002076 (1)
  • InterPro:IPR033681 (1)
  • Pfam:PF01151 (1)
  • EC:2.3.1.199 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA elovl1a-201 (1) 922
    elovl1a-203 (1) 1726
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM elovl1a No data available
    MARKER RELATIONSHIPS
    elovl1a Contained in: [BAC] DKEY-225F23 (1) (order this)
    elovl1a Encodes: [cDNA] MGC:103538 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005989 (1) 1406 bp
    Genomic GenBank:BX323588 (1) 248002 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5XJ87 (1) 315 aa
    Sequence Clusters UniGene:82281 (1)
    Sequence Information (all 16)
    ORTHOLOGY for elovl1a ( Chr: 2 )
    CITATIONS (28)