header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-041010-214
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: PAX interacting (with transcription-activation domain) protein 1
Gene Symbol: paxip1
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fa04b06, wu:fa04b06, zgc:92593 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in DNA repair. Predicted to localize to the nucleus. Orthologous to human PAXIP1 (PAX interacting protein 1).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92593]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7165510]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa5145 Point Mutation Unknown Premature Stop ENU
sa9641 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa17872 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa32936 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa32937 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa39846 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH paxip1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH paxip1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to DNA damage stimulus (more)
    Cellular Component nucleus (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001357 (1)
  • InterPro:IPR036420 (1)
  • PROSITE:PS50172 (1)
  • Pfam:PF00533 (1)
  • Pfam:PF12738 (1)
  • Pfam:PF16770 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA paxip1-202 (1) 3757
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM paxip1 No data available
    MARKER RELATIONSHIPS
    paxip1 Contained in: [BAC] CH211-207D6 (1) (order this)
    paxip1 Encodes: [EST] fa04b06, IMAGE:7165510 (1) (order this)
    [cDNA] MGC:92593 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005929 (1) 3746 bp
    Select Tool
    Genomic GenBank:CR855328 (1) 152638 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ID17 (1) 1136 aa
    Select Tool
    Sequence Clusters UniGene:522 (1)
    Sequence Information (all 20)
    OTHER paxip1 GENE PAGES
  • Alliance (1)
  • Gene:449658 (1)
  • VEGA:OTTDARG00000021576 (1)
  • Ensembl(GRCz11):ENSDARG00000005606 (2)
    • ORTHOLOGY for paxip1 ( Chr: 2 )
    CITATIONS (22)