ZFIN ID: ZDB-GENE-041008-168
Gene Name: bromodomain containing 1a
Gene Symbol: brd1a
Sequence Ontology ID : SO:0000704

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Previous Names: brd1, im:7138929, si:dkey-164m14.6 (1)

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity; orthologous to human BRD1 (bromodomain containing 1).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138929]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024541Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33480 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH brd1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH brd1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000313 (1)
  • InterPro:IPR001487 (1)
  • InterPro:IPR001965 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR019542 (1)
  • InterPro:IPR019786 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR034732 (1)
  • InterPro:IPR035502 (1)
  • InterPro:IPR036427 (1)
  • PROSITE:PS01359 (1)
  • PROSITE:PS50014 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50812 (1)
  • PROSITE:PS51805 (1)
  • Pfam:PF00439 (1)
  • Pfam:PF00855 (1)
  • Pfam:PF10513 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA brd1a-001 (1) 4208
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM brd1a No data available
    MARKER RELATIONSHIPS
    brd1aContained in: [BAC] DKEY-164M14 (1) (order this)
    brd1aEncodes: [EST] IMAGE:7138929 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_692971 (1) 3807bp
    Genomic GenBank:CR751234 (1) 218596bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QFR1 (1) 1142aa
    Sequence Clusters UniGene:135887 (1)
    Sequence Information (all 26)
    OTHER brd1a GENE PAGES
  • Alliance (1)
  • Gene:569574 (1)
  • VEGA:OTTDARG00000011126 (1)
  • ORTHOLOGY for brd1a (Chr: 4)
    CITATIONS (20)