ZFIN ID: ZDB-GENE-041001-6
Gene Name: novel immune-type receptor 9
Gene Symbol: nitr9
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: nitr9.1 (1), zgc:123078

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in phosphatidylinositol 3-kinase signaling and response to bacterium; predicted to localize to the integral component of membrane.
GENE EXPRESSION
All Expression Data: 7 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2008 [cssl:d0615]
  1 figure (1 image) from Thisse et al., 2008 [cssl:d0616]
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nitr9 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nitr9 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process response to bacterium (more)
Cellular Component integral component of membrane (more)
Molecular Function protein binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003599 (1)
  • InterPro:IPR007110 (1)
  • InterPro:IPR013106 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR036179 (1)
  • PROSITE:PS50835 (1)
  • Pfam:PF07686 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA nitr9-004 (1) 577
    mRNA ottdart00000052633 (1) 1465
    ncRNA ottdart00000061460 (1) 375
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nitr9 No data available
    MARKER RELATIONSHIPS
    nitr9Contained in: [BAC] CH73-46N24 (1) (order this), CH73-266M14 (1) (order this), CH211-262G18 (1) (order this), DKEY-7N10 (1) (order this)
    nitr9Encodes: [EST] cssl:d0615 (1) (order this), cssl:d0616 (1) (order this)
    [cDNA] MGC:123078 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005576 (1) 858bp
    Genomic GenBank:AL954849 (1) 162939bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ILQ4 (1) 316aa
    Sequence Clusters UniGene:133942 (1)
    Sequence Information (all 33)
    OTHER nitr9 GENE PAGES
  • Alliance (1)
  • Gene:449533 (1)
  • VEGA:OTTDARG00000003986 (1)
  • ORTHOLOGY for nitr9 (Chr: 7)
    CITATIONS (21)