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ZIRC
ZFIN ID: ZDB-GENE-041001-6
Gene Name: novel immune-type receptor 9
Gene Symbol: nitr9    Nomenclature History

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Previous Names: nitr9.1 (1), zgc:123078

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Involved in phosphatidylinositol 3-kinase signaling and response to bacterium. Predicted to localize to the integral component of membrane. Is expressed in digestive system; gill; immune system; and myeloid cell.
Genome Resources: Alliance (1),  Gene:449533 (1),  Ensembl(GRCz11):ENSDARG00000028333 (1)
GENE EXPRESSION
All Expression Data: 7 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2008 [cssl:d0615]
  1 figure (1 image) from Thisse et al., 2008 [cssl:d0616]
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nitr9 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nitr9 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process response to bacterium (more)
Cellular Component integral component of membrane (more)
Molecular Function protein binding (more)
GO Terms (all 5)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA nitr9-201 (1)    Ensembl 1465
ncRNA nitr9-004 (1) 577
ottdart00000061460 (1) 375
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab2-nitr9 monoclonal IgG2a , k Mouse 1
Ab1-nitr9 monoclonal IgG2b , k Mouse WB 2
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM nitr9 No data available
MARKER RELATIONSHIPS
nitr9 Contained in: [BAC] CH73-46N24 (1) (order this), CH73-266M14 (1) (order this), CH211-262G18 (1) (order this), DKEY-7N10 (1) (order this)
nitr9 Encodes: [EST] cssl:d0615 (1) (order this), cssl:d0616 (1) (order this)
[cDNA] MGC:123078 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001005576 (1) 858 bp
Genomic GenBank:AL954849 (1) 162939 bp
Select Tool
Polypeptide UniProtKB:A0A0R4ILQ4 (1) 316 aa
Sequence Clusters UniGene:133942 (1)
Sequence Information (all 33)
ORTHOLOGY for nitr9 ( Chr: 7 )
CITATIONS (22)