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ZIRC
ZFIN ID: ZDB-GENE-041001-210
Gene Name: tudor domain containing 6
Gene Symbol: tdrd6    Nomenclature History

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Previous Names: tdrd6a (1), si:dkey-30j22.9

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Orthologous to human TDRD6 (tudor domain containing 6).
Genome Resources: Alliance (1),  Gene:565665 (1),  Ensembl(GRCz11):ENSDARG00000070052 (1)
GENE EXPRESSION
All Expression Data: Fig. 6 from Turner et al., 2019
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021598Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • mz0d6d7 Point Mutation Unknown Unknown ENU
    sa3060 Point Mutation Unknown Premature Stop ENU
    sa9787 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23764 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43494 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH tdrd6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tdrd6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process germ cell development (more)
    Cellular Component chromatoid body (more)
    Molecular Function protein binding (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002999 (1)
  • InterPro:IPR035437 (1)
  • PROSITE:PS50304 (1)
  • Pfam:PF00567 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tdrd6-201 (1)    Ensembl 7305
    tdrd6-203 (1)    Ensembl 355
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-tdrd6 polyclonal Rabbit IHC 1
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tdrd6
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(piwil1:tdrd6-mCherry) piwil1 mCherrytdrd6 Danio rerio 1 1
    MARKER RELATIONSHIPS
    tdrd6 Contained in: [BAC] DKEY-30J22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_688932 (1) 2077 bp
    Genomic GenBank:BX510920 (1) 220240 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1R237 (1) 2117 aa
    Sequence Clusters UniGene:85168 (1)
    Sequence Information (all 11)
    ORTHOLOGY for tdrd6 ( Chr: 20 )
    CITATIONS (22)