Gene

rbfox1

ID
ZDB-GENE-040927-11
Name
RNA binding fox-1 homolog 1
Symbol
rbfox1 Nomenclature History
Previous Names
  • a2bp1
  • zgc:103635 (1)
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to enable mRNA binding activity. Acts upstream of or within heart contraction; hypothalamus development; and regulation of alternative mRNA splicing, via spliceosome. Predicted to be active in cytoplasm and nucleus. Is expressed in digestive system; heart; nervous system; neural keel; and skeletal muscle. Orthologous to human RBFOX1 (RNA binding fox-1 homolog 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rbfox1 Human Ortholog
No data available
Associated With rbfox1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR025670 Fox-1 C-terminal domain
Domain IPR034237 FOX1, RNA recognition motif
Family IPR017325 RNA binding protein Fox-1
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Fox-1 C-terminal domain FOX1, RNA recognition motif Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA binding protein Fox-1 RNA recognition motif domain
UniProtKB:A0A2R8RXA1 371
UniProtKB:A0A0R4IV43 368
UniProtKB:Q642J5 373
UniProtKB:I3ITF6 151
UniProtKB:I3IRZ3 233
UniProtKB:I3ISD3 205
UniProtKB:I3IS31 175
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations