ZFIN ID: ZDB-GENE-040914-82
Gene Name: VPS33A core subunit of CORVET and HOPS complexes
Gene Symbol: vps33a    Nomenclature History

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Previous Names: im:7136893, wu:fc08g01, wu:fc26c10

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to localize to CORVET complex and lysosome. Orthologous to human VPS33A (VPS33A core subunit of CORVET and HOPS complexes).
Genome Resources: Alliance (1),  Gene:448942 (1),  Ensembl(GRCz11):ENSDARG00000101116 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7136893]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18831 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-vps33a N/A 1
    MO2-vps33a N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH vps33a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Mucopolysaccharidosis-plus syndrome 617303
    DISEASE ASSOCIATED WITH vps33a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component late endosome membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA vps33a-201 (1)    Ensembl 2525
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM vps33a No data available
    MARKER RELATIONSHIPS
    vps33a Contained in: [BAC] CH211-157P22 (1), DKEY-204G14 (1) (order this)
    vps33a Encodes: [EST] faa77f06 (1), fc08g01, fc26c10 (1), IMAGE:7136893 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001099973 (1) 2525 nt
    Genomic GenBank:CT978957 (1) 164556 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4ID82 (1) 599 aa
    Sequence Information (all 13)
    ORTHOLOGY for vps33a ( Chr: 5 )
    CITATIONS (24)