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ZIRC
ZFIN ID: ZDB-GENE-040912-11
Gene Name: family with sequence similarity 43 member B
Gene Symbol: fam43b
Sequence Ontology ID : SO:0001217

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Previous Names: somitovasculin (1), TUF1 (1), zgc:92105

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in vasculature development. Is expressed in forebrain; somite border; and vasculature. Orthologous to human FAM43B (family with sequence similarity 43 member B).
GENE EXPRESSION
All Expression Data: Fig. 2 from Mariappan et al., 2009
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44037 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH fam43b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH fam43b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process vasculature development (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006020 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR033930 (1)
  • Pfam:PF14719 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA fam43b-201 (1) 2000
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM fam43b No data available
    MARKER RELATIONSHIPS
    fam43b Contained in: [BAC] DKEY-262N17 (1) (order this)
    fam43b Encodes: [cDNA] MGC:92105 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004547 (1) 2019 bp
    Genomic GenBank:CR762407 (1) 146422 bp
    Select Tool
    Polypeptide UniProtKB:F1R0I6 (1) 305 aa
    Sequence Clusters UniGene:22793 (1)
    Sequence Information (all 10)
    ORTHOLOGY for fam43b ( Chr: 23 )
    CITATIONS (15)