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ZIRC
ZFIN ID: ZDB-GENE-040827-2
Gene Name: leucine rich repeat containing 6
Gene Symbol: lrrc6
Sequence Ontology ID : SO:0001217

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Previous Names: lrrc6l (1), sea (1), seahorse (1), unm tg238a, zar (1), zator (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in several processes, including cilium movement involved in cell motility; embryonic morphogenesis; and motile cilium assembly. Localizes to the cytoplasm. Human ortholog(s) of this gene  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fa20r Point Mutation Exon 5 Premature Stop ENU
hi3308Tg Transgenic Insertion Intron 4 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • pd1087 Point Mutation Unknown Premature Stop ENU
    sa14388 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa14481 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19848 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19849 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19850 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25885 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33003 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39914 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tg238a Point Mutation Exon 3 Missense
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH lrrc6 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    primary ciliary dyskinesia 19 Ciliary dyskinesia, primary, 19 614935
    DISEASE ASSOCIATED WITH lrrc6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process convergent extension involved in gastrulation (more)
    Cellular Component cytoplasm (more)
    Molecular Function protein binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001611 (1)
  • InterPro:IPR032675 (1)
  • PROSITE:PS51450 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lrrc6-202 (1) 1791
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lrrc6 No data available
    MARKER RELATIONSHIPS
    lrrc6 Contained in: [BAC] CH211-66B9 (1) (order this), DKEY-177E13 (1) (order this)
    lrrc6 Encodes: [cDNA] MGC:193911 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002311 (1) 1758 bp
    Genomic GenBank:BX511268 (1) 167067 bp
    Select Tool
    Polypeptide UniProtKB:B3DH20 (1) 440 aa
    Sequence Clusters UniGene:80306 (1)
    Sequence Information (all 18)
    ORTHOLOGY for lrrc6 ( Chr: 2 )
    CITATIONS (41)