ZFIN ID: ZDB-GENE-040801-30
Gene Name: TRAF-interacting protein
Gene Symbol: traip    Nomenclature History

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Previous Name: zgc:100878

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have metal ion binding activity. Human ortholog(s) of this gene implicated in Seckel syndrome 9. Orthologous to human TRAIP (TRAF interacting protein).
Genome Resources: Alliance (1),  Gene:402900 (1),  Ensembl(GRCz11):ENSDARG00000011262 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141481]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21949 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44745 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH traip HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH traip VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA traip-201 (1)    Ensembl 2096
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM traip No data available
    MARKER RELATIONSHIPS
    traip Contained in: [BAC] CH73-138C4 (1)
    traip Encodes: [EST] IMAGE:7141481 (1)
    [cDNA] MGC:100878 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_205607 (1) 2092 nt
    Genomic GenBank:FP102275 (1) 15809 nt
    Polypeptide UniProtKB:F1QL47 (1) 453 aa
    Sequence Information (all 14)
    ORTHOLOGY for traip ( Chr: 11 )
    CITATIONS (20)