ZFIN ID: ZDB-GENE-040801-234
Gene Name: GDP-mannose pyrophosphorylase B
Gene Symbol: gmppb
Sequence Ontology ID : SO:0000704

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Previous Names: cb1066 (1), fc79b10, wu:fc79b10, zgc:92026

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 3 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2001 [cb1066]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  epidermis, hatching gland, lateral line system, notochord (all 8) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents: MO1-gmppb (1)
PHENOTYPE
Data: 4 figures from Carss et al., 2013
Observed in: eye, muscle sarcolemma, myoseptum, post-vent region (all 7) expand
DISEASE ASSOCIATED WITH gmppb HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal recessive limb-girdle muscular dystrophy type 2T Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 14 615352
muscular dystrophy-dystroglycanopathy Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 14 615350
Muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 14 615351
GENE ONTOLOGY
Ontology GO Term
Biological Process muscle fiber development (more)
Cellular Component cellular_component (more)
Molecular Function GTP binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001451 (1)
  • InterPro:IPR005835 (1)
  • InterPro:IPR011004 (1)
  • InterPro:IPR018357 (1)
  • InterPro:IPR029044 (1)
  • PROSITE:PS00101 (1)
  • Pfam:PF00132 (1)
  • Pfam:PF00483 (1)
  • EC:2.7.7.13 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gmppb-001 (1) 1873
    ncRNA gmppb-002 (1) 780
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gmppb No data available
    MARKER RELATIONSHIPS
    gmppbContained in: [Fosmid] CH1073-91K2 (1) (order this)
    gmppbContains: [SSLP] z4682
    gmppbEncodes: [EST] cb1066 (1) (order this), fc79b10
    [cDNA] MGC:92026 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003491 (1) 1870bp
    Genomic GenBank:FP102519 (1) 37082bp
    Select Tool
    Polypeptide UniProtKB:F1R683 (1) 360aa
    Sequence Clusters UniGene:105356 (1)
    Sequence Information (all 27)
    OTHER gmppb GENE PAGES
  • Alliance (1)
  • Gene:445097 (1)
  • VEGA:OTTDARG00000037033 (1)
  • Ensembl(GRCz10):ENSDARG00000017658 (1)
  • ORTHOLOGY for gmppb (Chr: 22)
    CITATIONS (21)