ZFIN ID: ZDB-GENE-040801-234
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: GDP-mannose pyrophosphorylase B
Gene Symbol: gmppb
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: cb1066 (1), fc79b10, wu:fc79b10, zgc:92026

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 9 figures from 3 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2001 [cb1066]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 4 figures from Carss et al., 2013
Observed in:
DISEASE ASSOCIATED WITH gmppb HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
autosomal recessive limb-girdle muscular dystrophy type 2T Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 14 615352
muscular dystrophy-dystroglycanopathy Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 14 615350
Muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 14 615351
GENE ONTOLOGY
Ontology GO Term
Biological Process muscle fiber development (more)
Cellular Component cellular_component (more)
Molecular Function GTP binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001451 (1)
  • InterPro:IPR005835 (1)
  • InterPro:IPR011004 (1)
  • InterPro:IPR018357 (1)
  • InterPro:IPR029044 (1)
    		•
  • PROSITE:PS00101 (1)
    		•
  • Pfam:PF00132 (1)
  • Pfam:PF00483 (1)
    		•
  • EC:2.7.7.13 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gmppb-001 (1) 1873
    Select Tool
    ncRNA gmppb-002 (1) 780
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gmppb No data available
    MARKER RELATIONSHIPS
    gmppbContained in: [Fosmid] CH1073-91K2 (1) (order this)
    gmppbContains: [SSLP] z4682
    gmppbEncodes: [EST] cb1066 (1) (order this), fc79b10
    [cDNA] MGC:92026 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003491 (1) 1870bp
    Select Tool
    Genomic GenBank:FP102519 (1) 37082bp
    Select Tool
    Polypeptide UniProtKB:F1R683 (1) 360aa
    Select Tool
    Sequence Clusters UniGene:105356 (1)
    Sequence Information (all 28)
    OTHER gmppb GENE PAGES
  • Alliance (1)
  • Gene:445097 (1)
  • VEGA:OTTDARG00000037033 (1)
  • Ensembl(GRCz11):ENSDARG00000017658 (1)
    • ORTHOLOGY for gmppb (Chr: 22)
    CITATIONS (21)