ZFIN ID: ZDB-GENE-040801-201
Gene Name: claudin k
Gene Symbol: cldnk    Nomenclature History

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Previous Names: claudin 31, zgc:91878

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have structural molecule activity. Predicted to be involved in bicellular tight junction assembly and cell adhesion. Predicted to localize to bicellular tight junction and plasma membrane. Is expressed in nervous system. Orthologous to human CLDN17 (claudin 17).
Genome Resources: Alliance (1),  Gene:445070 (1),  Ensembl(GRCz11):ENSDARG00000042357 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa98 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa33297 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cldnk HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cldnk VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process bicellular tight junction assembly (more)
    Cellular Component bicellular tight junction (more)
    Molecular Function structural molecule activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cldnk-201 (1)    Ensembl 1729
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    Name Type Isotype Host Organism Assay Source Publications
    Ab1-cldnk polyclonal Rabbit WB 1
    Ab2-cldnk monoclonal IgG2a Rat IHC, WB 3
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cldnk
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(cldnk:GAL4) cldnk GAL4 Danio rerio 1 13
    MARKER RELATIONSHIPS
    cldnk Contained in: [BAC] DKEY-285G17 (1) (order this)
    cldnk Encodes: [cDNA] MGC:91878 (1), MGC:192208 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001003464 (1) 1270 nt
    Genomic GenBank:BX682554 (1) 61290 nt
    Select Tool
    Polypeptide UniProtKB:Q6DBT9 (1) 216 aa
    Sequence Information (all 14)
    ORTHOLOGY for cldnk ( Chr: 3 )
    CITATIONS (39)