ZFIN ID: ZDB-GENE-040801-127
Gene Name: nuclear receptor subfamily 2, group E, member 1
Gene Symbol: nr2e1
Sequence Ontology ID : SO:0000704

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Previous Names: NR2D1 (1), fc30e03, fc39f12, TLL (1), wu:fc30e03, wu:fc39f12, zgc:100991

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Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 11 figures from 3 publications
Directly Submitted Expression Data: 6 figures (31 images) from Thisse et al., 2008 [MGC:100991]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  alar plate midbrain region, ciliary marginal zone, diencephalon, dorsal thalamus (all 22) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37076 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-nr2e1 (1)
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nr2e1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000536 (1)
  • InterPro:IPR001628 (1)
  • InterPro:IPR001723 (1)
  • InterPro:IPR013088 (1)
  • PROSITE:PS00031 (1)
  • PROSITE:PS51030 (1)
  • Pfam:PF00104 (1)
  • Pfam:PF00105 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nr2e1-001 (1) 2710
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nr2e1 No data available
    MARKER RELATIONSHIPS
    nr2e1Contained in: [BAC] CH211-10H8 (1) (order this)
    nr2e1Encodes: [EST] fc30e03, fc39f12
    [cDNA] MGC:100991 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003608 (1) 2730bp
    Genomic GenBank:CU138515 (1) 62544bp
    Select Tool
    Polypeptide UniProtKB:Q6DEH0 (1) 396aa
    Sequence Clusters UniGene:78647 (1)
    Sequence Information (all 14)
    OTHER nr2e1 GENE PAGES
  • Alliance (1)
  • Gene:445214 (1)
  • VEGA:OTTDARG00000026992 (1)
  • Ensembl(GRCz10):ENSDARG00000017107 (1)
  • ORTHOLOGY for nr2e1 (Chr: 20)
    CITATIONS (23)