ZFIN ID: ZDB-GENE-040801-127
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Gene Name: nuclear receptor subfamily 2, group E, member 1
Gene Symbol: nr2e1
Sequence Ontology ID : SO:0000704

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Previous Names: NR2D1 (1), fc30e03, fc39f12, TLL (1), wu:fc30e03, wu:fc39f12, zgc:100991

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Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 11 figures from 3 publications
Directly Submitted Expression Data: 6 figures (31 images) from Thisse et al., 2008 [MGC:100991]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
  alar plate midbrain region, ciliary marginal zone, diencephalon, dorsal thalamus (all 22) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37076 Point Mutation Unknown Splice Site ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nr2e1 HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000536 (1)
  • InterPro:IPR001628 (1)
  • InterPro:IPR001723 (1)
  • InterPro:IPR013088 (1)
    		•
  • PROSITE:PS00031 (1)
  • PROSITE:PS51030 (1)
    		•
  • Pfam:PF00104 (1)
  • Pfam:PF00105 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nr2e1-001 (1) 2710
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nr2e1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    nr2e1Contained in: [BAC] CH211-10H8 (1) (order this)
    nr2e1Encodes: [EST] fc30e03, fc39f12
    [cDNA] MGC:100991 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003608 (1) 2730bp
    Select Tool
    Genomic GenBank:CU138515 (1) 62544bp
    Select Tool
    Polypeptide UniProtKB:Q6DEH0 (1) 396aa
    Select Tool
    Sequence Clusters UniGene:78647 (1)
    Sequence Information (all 13)
    OTHER nr2e1 GENE PAGES
  • Gene:445214 (1)
  • VEGA:OTTDARG00000026992 (1)
  • Ensembl(GRCz10):ENSDARG00000017107 (1)
    • ORTHOLOGY for nr2e1 (Chr: 20)
    CITATIONS (19)