ZFIN ID: ZDB-GENE-040724-254
Gene Name: solute carrier family 30 member 9
Gene Symbol: slc30a9    Nomenclature History

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Previous Names: si:ch211-240l14.4, zgc:92098 (1), ZnT9 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have several functions, including nuclear receptor binding activity; nuclear receptor transcription coactivator activity; and zinc ion transmembrane transporter activity. Predicted to be involved in cellular zinc ion homeostasis; positive regulation of transcription by RNA polymerase II; and zinc ion transport. Predicted to localize to several cellular components, including cytoplasmic vesicle; cytoskeleton; and endoplasmic reticulum. Orthologous to human SLC30A9 (solute carrier family 30 member 9).
Genome Resources: Alliance (1),  Gene:497184 (1),  Ensembl(GRCz11):ENSDARG00000057272 (2)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7153183]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24966 Point Mutation Unknown Premature Stop ENU
sa42441 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc30a9 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    ?Birk-Landau-Perez syndrome 617595
    DISEASE ASSOCIATED WITH slc30a9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular zinc ion homeostasis (more)
    Cellular Component cytoplasmic vesicle (more)
    Molecular Function zinc ion transmembrane transporter activity (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript slc30a9-202 (1)    Ensembl 505
    mRNA slc30a9-201 (1)    Ensembl 3259
    slc30a9-203 (1)    Ensembl 561
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc30a9 No data available
    MARKER RELATIONSHIPS
    slc30a9 Contained in: [BAC] CH211-240L14, DKEY-109L4 (1) (order this)
    slc30a9 Encodes: [EST] IMAGE:7153183 (1)
    [cDNA] MGC:92098
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001008575 (1) 3242 nt
    Genomic GenBank:CT573279 (1) 264426 nt Blast at MegaBLAST
    Polypeptide UniProtKB:Q5PQZ3 (1) 573 aa
    Sequence Information (all 18)
    ORTHOLOGY for slc30a9 ( Chr: 14 )
    CITATIONS (30)