ZFIN Gene: s100b

ZFIN ID: ZDB-GENE-040718-290

ZFIN ID: ZDB-GENE-040718-290

Gene Name:

S100 calcium binding protein, beta (neural)

Gene Symbol:

s100b

Sequence Ontology ID :

SO:0000704

Previous Names:

si:dkey-110p14.2, wu:fq18b10, zgc:92776

Location:

Chr: 22 Mapping Details/Browsers

Nomenclature History

AUTOMATED DESCRIPTION

Predicted to have calcium ion binding activity and zinc ion binding activity. Human ortholog(s) of this gene implicated in Alzheimer's disease; Parkinson's disease; aspergillosis; and schizophrenia. ...

GENE EXPRESSION
All Expression Data:	7 figures from 3 publications
Directly Submitted Expression Data:	3 figures (5 images) from Rauch et al., 2003 [fq16d12]
Wild-type Stages, Structures:	Pharyngula:Prim-25 (36.0h-42.0h) to Adult (90d-730d, breeding adult)
	barbel bone element brain central canal eye gill heart integument lip liver muscle olfactory bulb olfactory epithelium renal system telencephalon radial glial cell telencephalon ventricular zone
Curated Microarray Expression:	GEO (1)

MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available

PHENOTYPE No data available

DISEASE ASSOCIATED WITH s100b HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH s100b VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Molecular Function	calcium ion binding (more)

GO Terms (all 3)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR001751 (1) InterPro:IPR002048 (1) InterPro:IPR011992 (1) InterPro:IPR013787 (1) InterPro:IPR028481 (1)	PROSITE:PS00303 (1)	Pfam:PF01023 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	s100b-201 (1)	1229	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

GENE PRODUCT DESCRIPTION

INTERACTIONS AND PATHWAYS

ANTIBODIES

Ab1-s100 (1)

PLASMIDSNo data available

CONSTRUCTS WITH SEQUENCES FROM s100b No data available

MARKER RELATIONSHIPS

s100bContained in:	[BAC] DKEY-110P14 (1) (order this)
s100bEncodes:	[EST] fq16d12 (1) (order this), fq18b10 [cDNA] MGC:92776 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001002552 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:BX649510 (1)	150194bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:Q6DGT8 (1)	95aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
Sequence Clusters	UniGene:14787 (1)

Sequence Information (all 17)

OTHER s100b GENE PAGES

Alliance (1)

Gene:436825 (1)

VEGA:OTTDARG00000009741 (1)

Ensembl(GRCz11):ENSDARG00000057598 (2)

ORTHOLOGY for s100b (Chr: 22)

CITATIONS (31)

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