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General Information
ZIRC
ZFIN ID: ZDB-GENE-040718-186
Gene Name: SRY-box transcription factor 1a
Gene Symbol: sox1a
Sequence Ontology ID : SO:0001217

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Previous Names: fi38c08, fj38h03, wu:fi38c08 (1), wu:fj38h03 (1), zgc:92865 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Contributes to DNA-binding transcription factor activity. Involved in positive regulation of DNA-binding transcription factor activity. Predicted to localize to the nuclear transcription factor  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ka701 Small Deletion Unknown Unknown CRISPR
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH sox1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sox1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of DNA-binding transcription factor activity (more)
Cellular Component transcription factor complex (more)
Molecular Function CONTRIBUTES_TO   DNA-binding transcription factor activity (more)
GO Terms (all 11)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA sox1a-201 (1) 1929
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM sox1a No data available
MARKER RELATIONSHIPS
sox1a Contained in: [BAC] DKEY-58D5 (1) (order this)
sox1a Encodes: [EST] fi38c08, fj38h03
[cDNA] MGC:92865 (1) (order this), MGC:113892 (1) (order this), MGC:191313 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001002483 (1) 1946 bp
Genomic GenBank:CR392332 (1) 128550 bp
Select Tool
Polypeptide UniProtKB:B2GNY1 (1) 336 aa
Sequence Clusters UniGene:6453 (1)
Sequence Information (all 24)
ORTHOLOGY for sox1a ( Chr: 9 )
CITATIONS (39)