header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040630-4
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: ubiquitin-like 3b
Gene Symbol: ubl3b
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: ubl3, zgc:103712 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the plasma membrane. Orthologous to human UBL3 (ubiquitin like 3).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103712]
  1 figure (1 image) from Thisse et al., 2005 [eu685]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22502 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ubl3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ubl3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR017000 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR039540 (1)
  • InterPro:IPR040015 (1)
    		•
  • PROSITE:PS50053 (1)
    		•
  • Pfam:PF13881 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ubl3b-002 (1) 853
    Select Tool
    ubl3b-003 (1) 919
    Select Tool
    mRNA ubl3b-201 (1) 2458
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ubl3b No data available
    MARKER RELATIONSHIPS
    ubl3bContained in: [BAC] CH211-126C2 (1) (order this)
    ubl3bEncodes: [EST] eu685 (1)
    [cDNA] MGC:103712 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212856 (1) 719bp
    Select Tool
    Genomic GenBank:CT573152 (1) 134793bp
    Select Tool
    Polypeptide UniProtKB:Q6TGS9 (1) 117aa
    Select Tool
    Sequence Clusters UniGene:30535 (1)
    Sequence Information (all 14)
    OTHER ubl3b GENE PAGES
  • Alliance (1)
  • Gene:405782 (1)
  • VEGA:OTTDARG00000020982 (1)
  • Ensembl(GRCz11):ENSDARG00000021556 (2)
    • ORTHOLOGY for ubl3b (Chr: 14)
    CITATIONS (23)