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ZIRC
ZFIN ID: ZDB-GENE-040630-4
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Gene Name: ubiquitin-like 3b
Gene Symbol: ubl3b    Nomenclature History

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Previous Names: ubl3, zgc:103712 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to localize to the plasma membrane. Orthologous to human UBL3 (ubiquitin like 3).
Genome Resources: Alliance (1),  Gene:405782 (1),  Ensembl(GRCz11):ENSDARG00000021556 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103712]
  1 figure (1 image) from Thisse et al., 2005 [eu685]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22502 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ubl3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ubl3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component membrane (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR017000 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR039540 (1)
  • InterPro:IPR040015 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF13881 (1)
    • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ubl3b-201 (1)    Ensembl 2458
    Select Tool
    ncRNA ubl3b-002 (1)    Ensembl 853
    Select Tool
    ubl3b-003 (1)    Ensembl 919
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ubl3b No data available
    MARKER RELATIONSHIPS
    ubl3b Contained in: [BAC] CH211-126C2 (1) (order this)
    ubl3b Encodes: [EST] eu685 (1)
    [cDNA] MGC:103712 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212856 (1) 719 bp
    Select Tool
    Genomic GenBank:CT573152 (1) 134793 bp
    Select Tool
    Polypeptide UniProtKB:Q6TGS9 (1) 117 aa
    Select Tool
    Sequence Clusters UniGene:30535 (1)
    Sequence Information (all 14)
    ORTHOLOGY for ubl3b ( Chr: 14 )
    CITATIONS (23)