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ZIRC
ZFIN ID: ZDB-GENE-040625-61
Gene Name: mediator complex subunit 6
Gene Symbol: med6    Nomenclature History

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Previous Names: fa14c11, wu:fa14c11, zgc:86933

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have transcription coregulator activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly and regulation of transcription by RNA polymerase II. Predicted to localize to the core mediator complex and mediator complex. Orthologous to human MED6 (mediator complex subunit 6).
Genome Resources: Alliance (1),  Gene:415174 (1),  Ensembl(GRCz11):ENSDARG00000034734 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH med6 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH med6 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component mediator complex (more)
Molecular Function transcription coregulator activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007018 (1)
  • InterPro:IPR016820 (1)
  • InterPro:IPR038566 (1)
  • Pfam:PF04934 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript med6-202 (1)    Ensembl 859
    mRNA med6-201 (1)    Ensembl 1154
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM med6 No data available
    MARKER RELATIONSHIPS
    med6 Contained in: [BAC] CH211-259K16 (1) (order this)
    med6 Encodes: [EST] fa14c11
    [cDNA] MGC:86933 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002084 (1) 1470 bp
    Genomic GenBank:CR354599 (1) 149455 bp
    Select Tool
    Polypeptide UniProtKB:Q6IQ63 (1) 254 aa
    Sequence Clusters UniGene:32670 (1)
    Sequence Information (all 12)
    ORTHOLOGY for med6 ( Chr: 13 )
    CITATIONS (18)