Gene

ctcf

ID
ZDB-GENE-040624-5
Name
CCCTC-binding factor (zinc finger protein)
Symbol
ctcf Nomenclature History
Previous Names
  • im:7152666
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Exhibits chromatin binding activity. Involved in regulation of transcription by RNA polymerase II and skeletal muscle tissue development. Predicted to localize to nuclear chromatin. Is expressed in brain; digestive system; immature eye; notochord; and somite. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 21. Orthologous to human CTCF (CCCTC-binding factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
12 figures from 6 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ctcf Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
autosomal dominant intellectual developmental disorder 21 Alliance Intellectual developmental disorder, autosomal dominant 21 615502
Associated With ctcf Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013087 Zinc finger C2H2-type
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
Domain Details Per Protein
Protein Length Zinc finger C2H2 superfamily Zinc finger C2H2-type
UniProtKB:Q6JAA4 798
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ctcf-201 (1) Ensembl 4,265 nt
mRNA ctcf-202 (1) Ensembl 253 nt
mRNA ctcf-203 (1) Ensembl 572 nt
mRNA ctcf-204 (1) Ensembl 6,319 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-ctcf polyclonal Rabbit
  • IHC
  • WB
1
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations