header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040614-2
Gene Name: intraflagellar transport 20 homolog (Chlamydomonas)
Gene Symbol: ift20
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:103674

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in several processes, including centrosome localization; intraciliary transport; and regulation of platelet-derived growth factor receptor-alpha signaling pathway. Localizes  ...
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027619Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH ift20 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ift20 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intraciliary transport (more)
    Cellular Component axoneme (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR028172 (1)
  • Pfam:PF14931 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ift20-002 (1) 818
    mRNA ift20-202 (1) 1104
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ift20 No data available
    MARKER RELATIONSHIPS
    ift20Contained in: [BAC] CH211-167J9 (order this)
    ift20Encodes: [cDNA] MGC:103674 (1) (order this), MGC:192324 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001833 (1) 1137bp
    Genomic GenBank:CR848814 (1) 79851bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4I9H0 (1) 132aa
    Sequence Clusters UniGene:31003 (1)
    Sequence Information (all 20)
    ORTHOLOGY for ift20 (Chr: 15)
    CITATIONS (25)