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ZIRC
ZFIN ID: ZDB-GENE-040520-2
Gene Name: TBP-like 1
Gene Symbol: tbpl1    Nomenclature History

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Previous Names: tlp (1), trp (1), tlf (1), trf2 (1), zgc:92340

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity; transcription factor binding activity; and transcription regulatory region DNA binding activity. Involved in embryo development and transcription by RNA polymerase II. Predicted to localize to the cytoplasm; transcription factor TFIID complex; and transcription factor TFIIIB complex. Orthologous to human TBPL1 (TATA-box binding protein like 1).
Genome Resources: Alliance (1),  Gene:403035 (1),  Ensembl(GRCz11):ENSDARG00000036868 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tbpl1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tbpl1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process embryo development ending in birth or egg hatching (more)
Cellular Component cytoplasm (more)
Molecular Function DNA binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000814 (1)
  • InterPro:IPR012295 (1)
  • InterPro:IPR015445 (1)
  • Pfam:PF00352 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tbpl1-201 (1)    Ensembl 1519
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tbpl1 No data available
    MARKER RELATIONSHIPS
    tbpl1 Contained in: [BAC] DKEY-161P7 (1) (order this), DKEY-190D14 (1) (order this)
    tbpl1 Encodes: [cDNA] MGC:92340 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205722 (1) 1447 bp
    Genomic GenBank:BX927365 (1) 229608 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5U385 (1) 186 aa
    Sequence Clusters UniGene:85568 (1)
    Sequence Information (all 16)
    ORTHOLOGY for tbpl1 ( Chr: 23 )
    CITATIONS (20)