ZFIN ID: ZDB-GENE-040426-741
Gene Name: RNA binding protein, mRNA processing factor 2b
Gene Symbol: rbpms2b
Sequence Ontology ID : SO:0000704

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Previous Names: rbpms2, Hermes (1), zgc:55559 (1), zgc:77170 (1)

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits mRNA binding activity; involved in dendrite morphogenesis, regulation of retinal ganglion cell axon guidance, and retinal ganglion cell axon guidance; orthologous to human RBPMS2 (RNA  ...
GENE EXPRESSION
All Expression Data: 15 figures from 8 publications
Directly Submitted Expression Data: 7 figures (15 images) from Thisse et al., 2004 [MGC:55559]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ae32 Insertion Unknown Unknown CRISPR
sa9329 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18890 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tpl96Gt Transgenic Insertion Unknown Unknown DNA
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rbpms2b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rbpms2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dendrite morphogenesis (more)
    Cellular Component U1 snRNP (more)
    Molecular Function mRNA binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR034787 (1)
  • InterPro:IPR035979 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA rbpms2b-005 (1) 730
    rbpms2b-006 (1) 502
    rbpms2b-008 (1) 832
    mRNA rbpms2b-201 (1) 1911
    aberrant processed transcript rbpms2b-202 (1) 768
    mRNA rbpms2b-206 (1) 764
    rbpms2b-207 (1) 871
    rbpms2b-208 (1) 317
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rbpms2b
    MARKER RELATIONSHIPS
    rbpms2bContained in: [BAC] CH211-231O17 (1) (order this), DKEY-24M14 (1) (order this)
    rbpms2bEncodes: [cDNA] MGC:55559 (1) (order this), MGC:77170 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200259 (1) 1901bp
    Genomic GenBank:BX663612 (1) 181415bp
    Select Tool
    Polypeptide UniProtKB:Q7ZUL7 (1) 200aa
    Sequence Clusters UniGene:81683 (1)
    Sequence Information (all 23)
    OTHER rbpms2b GENE PAGES
  • Alliance (1)
  • Gene:393229 (1)
  • VEGA:OTTDARG00000020270 (1)
  • Ensembl(GRCz11):ENSDARG00000079578 (2)
  • ORTHOLOGY for rbpms2b (Chr: 7)
    CITATIONS (35)