ZFIN ID: ZDB-GENE-040426-2918
Gene Name: serine incorporator 5
Gene Symbol: serinc5
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: sb:cb651, wu:fb37d09, zgc:55396 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in defense response to virus, detection of virus, and innate immune response; predicted to localize to the plasma membrane; orthologous to human SERINC5 (serine incorporator  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (25 images) from Thisse et al., 2001 [cb651]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015730Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la015731Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la025158Tg Transgenic Insertion Unknown Unknown DNA
    la025159Tg Transgenic Insertion Unknown Unknown DNA
    la025160Tg Transgenic Insertion Unknown Unknown DNA
    la025161Tg Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH serinc5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH serinc5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process defense response to virus (more)
    Cellular Component plasma membrane (more)
    Molecular Function L-serine transmembrane transporter activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005016 (1)
  • InterPro:IPR029555 (1)
  • Pfam:PF03348 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA serinc5-201 (1) 4891
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM serinc5 No data available
    MARKER RELATIONSHIPS
    serinc5Contained in: [BAC] CH211-198E13 (1) (order this), CH211-223O15 (1) (order this)
    [Fosmid] CH1073-311A17 (1) (order this)
    serinc5Contains: [STS] chunp30340
    serinc5Encodes: [EST] cb651 (1) (order this), fb37d09 (1)
    [cDNA] MGC:55396 (1) (order this), MGC:192824 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213514 (1) 2096bp
    Genomic GenBank:AL935198 (1) 200697bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q803X0 (1) 460aa
    Sequence Clusters UniGene:104867 (1)
    Sequence Information (all 23)
    OTHER serinc5 GENE PAGES
  • Alliance (1)
  • Gene:406835 (1)
  • VEGA:OTTDARG00000018905 (1)
  • Ensembl(GRCz11):ENSDARG00000008153 (2)
  • ORTHOLOGY for serinc5 (Chr: 5)
    CITATIONS (25)