ZFIN ID: ZDB-GENE-040426-2904
Gene Name: ER membrane protein complex subunit 3
Gene Symbol: emc3
Sequence Ontology ID : SO:0000704

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Previous Names: loc55831, pob, wu:fi32f05, wu:fj63h08, zgc:63727

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Involved in photoreceptor cell maintenance and retina development in camera-type eye; localizes to the Golgi apparatus and trans-Golgi network transport vesicle; orthologous to human EMC3 (ER  ...
GENE EXPRESSION
All Expression Data: 9 figures from 2 publications
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2004 [MGC:63727]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 6 (144.0h-168.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a1 Point Mutation Acceptor Splice Site Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12923 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33938 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 2 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH emc3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH emc3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process photoreceptor cell maintenance (more)
    Cellular Component Golgi apparatus (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002809 (1)
  • InterPro:IPR008568 (1)
  • Pfam:PF01956 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA emc3-002 (1) 527
    mRNA emc3-201 (1) 2565
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM emc3 No data available
    MARKER RELATIONSHIPS
    emc3Contained in: [BAC] DKEY-178O3 (1) (order this)
    emc3Contains: [SNP] rs3727997 (1), rs3727998 (1), rs3727999 (1), rs3728000 (1)
    emc3Encodes: [EST] fi32f05, fj63h08
    [cDNA] MGC:63727 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213505 (1) 2549bp
    Genomic GenBank:BX957236 (1) 211391bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q7SXW4 (1) 261aa
    Sequence Clusters UniGene:80620 (1)
    Sequence Information (all 19)
    OTHER emc3 GENE PAGES
  • Alliance (1)
  • Gene:406826 (1)
  • VEGA:OTTDARG00000019903 (1)
  • Ensembl(GRCz11):ENSDARG00000020607 (2)
  • ORTHOLOGY for emc3 (Chr: 6)
    CITATIONS (33)