ZFIN ID: ZDB-GENE-040426-2678
Gene Name: programmed cell death 6 interacting protein
Gene Symbol: pdcd6ip    Nomenclature History

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Previous Names: wu:fb70d03 (1), wu:fy65h02 (1), zgc:63638

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Is expressed in cloaca; epidermis; otic vesicle; and sensory system. Orthologous to human PDCD6IP (programmed cell death 6 interacting protein).
Genome Resources: Alliance (1),  Gene:406669 (1),  Ensembl(GRCz11):ENSDARG00000025269 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa5928 Point Mutation Unknown Premature Stop ENU
sa9404 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43338 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-pdcd6ip N/A 1
    MO2-pdcd6ip N/A 1
    DISEASE ASSOCIATED WITH pdcd6ip HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pdcd6ip VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pdcd6ip-201 (1)    Ensembl 4172
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pdcd6ip No data available
    MARKER RELATIONSHIPS
    pdcd6ip Contained in: [BAC] CH73-92O9 (1)
    pdcd6ip Encodes: [EST] fb70d03, fy65h02
    pdcd6ip Has Artifact: [cDNA] MGC:63638 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213360 (1) 4173 nt
    Genomic GenBank:CU469582 (1) 53223 nt
    Select Tool
    Polypeptide UniProtKB:B8JLR1 (1) 866 aa
    Sequence Information (all 19)
    ORTHOLOGY for pdcd6ip ( Chr: 19 )
    CITATIONS (22)