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ZIRC
ZFIN ID: ZDB-GENE-040426-2619
Gene Name: cartilage associated protein
Gene Symbol: crtap
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: wu:fb47h01, zgc:85621

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in peptidyl-proline hydroxylation to 3-hydroxy-L-proline; predicted to localize to the endoplasmic reticulum; orthologous to human CRTAP (cartilage associated protein).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (11 images) from Thisse et al., 2004 [MGC:85621]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa29258 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36907 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH crtap HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    osteogenesis imperfecta type 7 Osteogenesis imperfecta, type VII 610682
    DISEASE ASSOCIATED WITH crtap VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peptidyl-proline hydroxylation to 3-hydroxy-L-proline (more)
    Cellular Component endoplasmic reticulum (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011990 (1)
  • InterPro:IPR033212 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA crtap-201 (1) 1501
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM crtap No data available
    MARKER RELATIONSHIPS
    crtapContained in: [BAC] CH211-207C15 (1) (order this), DKEY-228A15 (1) (order this)
    crtapEncodes: [EST] fb47h01 (1)
    [cDNA] MGC:85621 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001001406 (1) 1518bp
    Genomic GenBank:BX324146 (1) 230267bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q1L8P0 (1) 396aa
    Sequence Clusters UniGene:76949 (1)
    Sequence Information (all 13)
    ORTHOLOGY for crtap (Chr: 19)
    CITATIONS (19)