ZFIN ID: ZDB-GENE-040426-2482
Gene Name: syntaxin binding protein 2
Gene Symbol: stxbp2    Nomenclature History

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Previous Name: zgc:85807

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to be involved in vesicle docking involved in exocytosis. Human ortholog(s) of this gene implicated in familial hemophagocytic lymphohistiocytosis 5. Is expressed in brain; epidermis; liver; periderm; and sensory system. Orthologous to human STXBP2 (syntaxin binding protein 2).
Genome Resources: Alliance (1),  Gene:406578 (1),  Ensembl(GRCz11):ENSDARG00000007603 (2)
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:85807]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH stxbp2 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
familial hemophagocytic lymphohistiocytosis 5 Alliance Hemophagocytic lymphohistiocytosis, familial, 5 613101
DISEASE ASSOCIATED WITH stxbp2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process vesicle docking involved in exocytosis (more)
Cellular Component plasma membrane (more)
Molecular Function syntaxin-1 binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA stxbp2-201 (1)    Ensembl 2529
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM stxbp2 No data available
MARKER RELATIONSHIPS
stxbp2 Contained in: [BAC] CH211-280H11 (1), DKEYP-61H1 (1)
stxbp2 Encodes: [cDNA] MGC:85807 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_213289 (1) 2542 nt
Genomic GenBank:AL954361 (1) 161681 nt
Select Tool
Polypeptide UniProtKB:F1RAE9 (1) 595 aa
Sequence Information (all 12)
ORTHOLOGY for stxbp2 ( Chr: 3 )
CITATIONS (23)