ZFIN ID: ZDB-GENE-040426-2269
Gene Name: upstream transcription factor 1, like
Gene Symbol: usf1l    Nomenclature History

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Previous Names: usf2, wu:fb22c09, zgc:77845

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have protein dimerization activity. Human ortholog(s) of this gene implicated in cardiovascular system disease and type 2 diabetes mellitus. Orthologous to human USF1 (upstream transcription factor 1).
Genome Resources: Alliance (1),  Gene:406475 (1),  Ensembl(GRCz11):ENSDARG00000014463 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18350 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH usf1l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH usf1l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function protein dimerization activity (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
    Homologous_superfamily IPR036638 Helix-loop-helix DNA-binding domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA usf1l-201 (1)    Ensembl 1650
    usf1l-202 (1)    Ensembl 772
    usf1l-203 (1)    Ensembl 756
    usf1l-205 (1)    Ensembl 757
    usf1l-206 (1)    Ensembl 920
    ncRNA usf1l-002 (1) 716
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM usf1l No data available
    MARKER RELATIONSHIPS
    usf1l Contained in: [BAC] CH211-89P1 (1), CH211-215C18 (1)
    usf1l Encodes: [EST] fb22c09 (1)
    [cDNA] MGC:77845 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213194 (1) 1641 bp
    Genomic GenBank:BX276128 (1) 176461 bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QG36 (1) 283 aa
    Sequence Clusters UniGene:76786 (1)
    Sequence Information (all 19)
    ORTHOLOGY for usf1l ( Chr: 5 )
    CITATIONS (16)