ZFIN ID: ZDB-GENE-040426-1911
Gene Name: cytidine deaminase b
Gene Symbol: cdab    Nomenclature History

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Previous Names: cda, zgc:77948

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have cytidine deaminase activity and zinc ion binding activity. Predicted to be involved in cytidine deamination. Predicted to localize to cytosol. Is expressed in liver. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Orthologous to human CDA (cytidine deaminase).
Genome Resources: Alliance (1),  Gene:402979 (1),  Ensembl(GRCz11):ENSDARG00000038199 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (2 images) from Thisse et al., 2004 [MGC:77948]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21834 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cdab HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdab VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cytidine deamination (more)
    Cellular Component cytosol (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdab-201 (1)    Ensembl 1429
    ncRNA cda-002 (1)    Ensembl 426
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdab No data available
    MARKER RELATIONSHIPS
    cdab Contained in: [BAC] DKEY-33M11 (1) (order this)
    cdab Encodes: [cDNA] MGC:77948 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_205679 (1) 1335 nt
    Genomic GenBank:CR558302 (1) 199875 nt
    Select Tool
    Polypeptide UniProtKB:Q6P0R4 (1) 159 aa
    Sequence Information (all 8)
    ORTHOLOGY for cdab ( Chr: 11 )
    CITATIONS (21)