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ZIRC
ZFIN ID: ZDB-GENE-040426-1831
Gene Name: endonuclease/exonuclease/phosphatase family domain containing 1
Gene Symbol: eepd1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:77395 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity. Predicted to be involved in DNA repair. Orthologous to human EEPD1 (endonuclease/exonuclease/phosphatase family domain containing 1).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [MGC:77395]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32236 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH eepd1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH eepd1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process DNA repair (more)
    Molecular Function DNA binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003583 (1)
  • InterPro:IPR010994 (1)
  • InterPro:IPR036691 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA eepd1-201 (1) 2345
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM eepd1 No data available
    MARKER RELATIONSHIPS
    eepd1Contained in: [BAC] CH73-171O20 (1) (order this)
    eepd1Encodes: [cDNA] MGC:77395 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205759 (1) 2135bp
    Genomic GenBank:CU928061 (1) 99630bp
    Select Tool
    Polypeptide UniProtKB:F1Q8T0 (1) 550aa
    Sequence Clusters UniGene:30522 (1)
    Sequence Information (all 14)
    ORTHOLOGY for eepd1 (Chr: 19)
    CITATIONS (18)