header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1759
Gene Name: retinol dehydrogenase 8b
Gene Symbol: rdh8b    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: rdh8l, zf 1.3 (1), zfprRDH1 (1), zgc:73320

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have estradiol 17-beta-dehydrogenase activity. Predicted to be involved in estrogen biosynthetic process and oxidation-reduction process. Predicted to localize to the cytoplasm. Is expressed in brain; eye; fin; retina; and retinal photoreceptor layer. Orthologous to human RDH8 (retinol dehydrogenase 8).
Genome Resources: Alliance (1),  Gene:393761 (1),  Ensembl(GRCz11):ENSDARG00000105060 (1)
GENE EXPRESSION
All Expression Data: 9 figures from 3 publications
Directly Submitted Expression Data: 6 figures (2 images) from Thisse et al., 2004 [MGC:73320]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rdh8b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rdh8b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process estrogen biosynthetic process (more)
Cellular Component cytoplasm (more)
Molecular Function NOT   estradiol 17-beta-dehydrogenase activity (more)
GO Terms (all 6)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA rdh8b-201 (1)    Ensembl 2088
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM rdh8b No data available
MARKER RELATIONSHIPS
rdh8b Contained in: [Fosmid] CH1073-162B4 (order this)
rdh8b Encodes: [cDNA] MGC:73320 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200788 (1) 2035 bp
Genomic GenBank:CU550701 (1) 35657 bp
Select Tool
Polypeptide UniProtKB:F1QT23 (1) 317 aa
Sequence Clusters UniGene:84693 (1)
Sequence Information (all 12)
ORTHOLOGY for rdh8b ( Chr: 1 )
CITATIONS (16)