Gene

jmjd6

ID
ZDB-GENE-040426-17
Name
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
Symbol
jmjd6 Nomenclature History
Previous Names
  • jmjd6a (1)
  • psr (1)
  • ptdsr (1)
  • zfpsr (1)
  • zgc:66264
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to enable 2-oxoglutarate-dependent dioxygenase activity; P-TEFb complex binding activity; and single-stranded RNA binding activity. Acts upstream of or within phagocytosis. Predicted to be located in nucleolus and nucleoplasm. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; hatching gland; heart; pronephros; and somite. Orthologous to human JMJD6 (jumonji domain containing 6, arginine demethylase and lysine hydroxylase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 5 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from Hong et al., 2004
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With jmjd6 Human Ortholog
No data available
Associated With jmjd6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003347 JmjC domain
Domain Details Per Protein
Protein Length JmjC domain
UniProtKB:Q6PFM0 403
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations