ZFIN ID: ZDB-GENE-040426-1639
Gene Name: sperm flagellar 1
Gene Symbol: spef1    Nomenclature History

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Previous Name: zgc:66426

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have microtubule binding activity. Predicted to be involved in regulation of cytoskeleton organization. Predicted to localize to axoneme.
Genome Resources: Alliance (1),  Gene:393499 (1),  Ensembl(GRCz11):ENSDARG00000022007 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7145134]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15680 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH spef1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH spef1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of cytoskeleton organization (more)
    Cellular Component axoneme (more)
    Molecular Function microtubule binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA spef1-201 (1)    Ensembl 771
    spef1-202 (1)    Ensembl 1678
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM spef1 No data available
    MARKER RELATIONSHIPS
    spef1 Contained in: [BAC] CH211-217G15, CH211-223P8 (1)
    spef1 Encodes: [EST] IMAGE:7145134 (1)
    [cDNA] MGC:66426 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200527 (1) 1590 nt
    Genomic GenBank:AL929005 (1) 166364 nt
    Select Tool
    Polypeptide UniProtKB:B7ZCZ9 (1) 231 aa
    Sequence Information (all 14)
    ORTHOLOGY for spef1 ( Chr: 13 )
    CITATIONS (15)