ZFIN ID: ZDB-GENE-040426-1453
Gene Name: actin related protein 2/3 complex, subunit 5-like, a
Gene Symbol: arpc5la    Nomenclature History

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Previous Names: arpc5l, zgc:65881 (1), zgc:77408

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have actin filament binding activity. Predicted to be involved in Arp2/3 complex-mediated actin nucleation and cell migration. Predicted to localize to Arp2/3 protein complex and cytoplasm. Is expressed in notochord. Orthologous to human ARPC5L (actin related protein 2/3 complex subunit 5 like).
Genome Resources: Alliance (1),  Gene:393550 (1),  Ensembl(GRCz11):ENSDARG00000041720 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [MGC:65881]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arpc5la HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH arpc5la VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process Arp2/3 complex-mediated actin nucleation (more)
Cellular Component actin cytoskeleton (more)
Molecular Function actin filament binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arpc5la-201 (1)    Ensembl 1425
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arpc5la No data available
MARKER RELATIONSHIPS
arpc5la Contained in: [BAC] CH211-152P23 (1)
arpc5la Encodes: [cDNA] MGC:65881 (1), MGC:77408 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_200578 (1) 1395 nt
Genomic GenBank:CR354441 (1) 113575 nt
Select Tool
Polypeptide UniProtKB:Q6P0D3 (1) 150 aa
Sequence Information (all 11)
ORTHOLOGY for arpc5la ( Chr: 8 )
CITATIONS (20)