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ZIRC
ZFIN ID: ZDB-GENE-040426-1391
Gene Name: transformer 2 alpha homolog
Gene Symbol: tra2a
Sequence Ontology ID : SO:0001217

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Previous Name: zgc:64175 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Predicted to be involved in positive regulation of mRNA splicing, via spliceosome. Predicted to localize to the nucleus and ribonucleoprotein complex.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64175]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tra2a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tra2a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of mRNA splicing, via spliceosome (more)
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 6)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA tra2a-004 (1) 701
mRNA tra2a-201 (1) 1486
aberrant processed transcript tra2a-202 (1) 1043
mRNA tra2a-204 (1) 984
aberrant processed transcript tra2a-205 (1) 743
mRNA tra2a-206 (1) 809
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM tra2a No data available
MARKER RELATIONSHIPS
tra2a Contained in: [BAC] CH211-155K24 (1) (order this)
tra2a Encodes: [EST] fb49f06 (1)
[cDNA] MGC:64175 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200416 (1) 1447 bp
Genomic GenBank:BX469899 (1) 184184 bp
Select Tool
Polypeptide UniProtKB:A0A0R4IBY2 (1) 298 aa
Sequence Clusters UniGene:75585 (1)
Sequence Information (all 20)
ORTHOLOGY for tra2a ( Chr: 19 )
CITATIONS (23)