header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1391
Gene Name: transformer 2 alpha homolog
Gene Symbol: tra2a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:64175 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Predicted to be involved in positive regulation of mRNA splicing, via spliceosome. Predicted to localize to the nucleus and ribonucleoprotein complex. Orthologous to human TRA2A (transformer 2 alpha homolog).
Genome Resources: Alliance (1),  Gene:393388 (1),  Ensembl(GRCz11):ENSDARG00000007863 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:64175]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tra2a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tra2a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process positive regulation of mRNA splicing, via spliceosome (more)
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 7)
TRANSCRIPTS
Type Name Length (nt) Analysis
aberrant processed transcript tra2a-202 (1)    Ensembl 1043
tra2a-205 (1)    Ensembl 743
mRNA tra2a-201 (1)    Ensembl 1486
tra2a-204 (1)    Ensembl 984
tra2a-206 (1)    Ensembl 809
ncRNA tra2a-004 (1)    Ensembl 701
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM tra2a No data available
MARKER RELATIONSHIPS
tra2a Contained in: [BAC] CH211-155K24 (1) (order this)
tra2a Encodes: [EST] fb49f06 (1)
[cDNA] MGC:64175 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_200416 (1) 1447 bp
Genomic GenBank:BX469899 (1) 184184 bp
Select Tool
Polypeptide UniProtKB:A0A0R4IBY2 (1) 298 aa
Sequence Clusters UniGene:75585 (1)
Sequence Information (all 20)
ORTHOLOGY for tra2a ( Chr: 19 )
CITATIONS (24)